symlink installGithub.r too

tidyverse/Dockerfile

@@ -19,6 +19,7 @@ RUN apt-get update -qq && apt-get -y --no-install-recommends install \
   && echo "R_LIBS=\${R_LIBS-'/usr/local/lib/R/site-library:/usr/local/lib/R/library:/usr/lib/R/library'}" >> /usr/local/lib/R/etc/Renviron \
   && Rscript -e "install.packages(c('littler', 'docopt'), repo = '$MRAN')" \
   && ln -s /usr/local/lib/R/site-library/littler/examples/install2.r /usr/local/bin/install2.r \
+  && ln -s /usr/local/lib/R/site-library/littler/examples/installGithub.r /usr/local/bin/installGithub.r \
   && ln -s /usr/local/lib/R/site-library/littler/bin/r /usr/local/bin/r \
   && install2.r --error \
   --repos 'http://www.bioconductor.org/packages/release/bioc' \

tidyverse/install.r

-#!/usr/bin/env Rscript
-#
-# A simple example to install one or more packages
-# Copyright (C) 2006 - 2015  Dirk Eddelbuettel
-# Modified 2016 Carl Boettiger
-# Released under GPL (>= 2)
-
-argv <- commandArgs(TRUE)
-
-if (is.null(argv) | length(argv) < 1) {
-    cat("Usage: installr.r pkg1 [pkg2 pkg3 ...]\n\n")
-    cat("Set environment variables REPOS and LIBLOC to overrride defaults.\n")
-    cat("Installs pkg1, ... from existing files with matching extension.\n")
-    q()
-}
-
-## adjust as necessary, see help('download.packages')
-repos <- Sys.getenv("REPOS")
-if( repos == "") repos <- getOption("repos")
-
-
-withCallingHandlers(
-  sapply(argv, install.packages, repos = repos, dep = as.logical(Sys.getenv("INCLUDE_SUGGESTS"))), 
-  warning = stop)
-
-## clean up any temp file containing CRAN directory information
-sapply(list.files(path = tempdir(), pattern = "^(repos|libloc).*\\.rds$", full.names = TRUE), unlink)