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Commit 1bc2d625 authored by Carl Boettiger's avatar Carl Boettiger
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include bioconductor for devtools suggests

parent 23d900d1
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......@@ -21,5 +21,9 @@ RUN apt-get update -qq && apt-get -y --no-install-recommends install \
&& Rscript -e "install.packages(c('littler', 'docopt'), repo = '$MRAN')" \
&& ln -s /usr/local/lib/R/site-library/littler/examples/install2.r /usr/local/bin/install2.r \
&& ln -s /usr/local/lib/R/site-library/littler/bin/r /usr/local/bin/r \
&& install2.r --error --repos $MRAN --deps "TRUE" tidyverse devtools profvis
&& install2.r --error \
--repos 'http://www.bioconductor.org/packages/release/bioc' \
--repos $MRAN \
--deps "TRUE" \
tidyverse devtools profvis
......@@ -20,5 +20,9 @@ RUN apt-get update -qq && apt-get -y --no-install-recommends install \
&& Rscript -e "install.packages(c('littler', 'docopt'), repo = '$MRAN')" \
&& ln -s /usr/local/lib/R/site-library/littler/examples/install2.r /usr/local/bin/install2.r \
&& ln -s /usr/local/lib/R/site-library/littler/bin/r /usr/local/bin/r \
&& install2.r --error --repos $MRAN --deps "TRUE" tidyverse devtools profvis
&& install2.r --error \
--repos 'http://www.bioconductor.org/packages/release/bioc' \
--repos $MRAN \
--deps "TRUE" \
tidyverse devtools profvis
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